PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do006856.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 329aa    MW: 35393.4 Da    PI: 6.805
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do006856.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10172230563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  Do006856.1 172 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTTEN 230
                 9**********************************************999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-15168232IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013170233IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-10172223No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-11172226No hitNo description
PfamPF001702.4E-9172230IPR004827Basic-leucine zipper domain
CDDcd147033.15E-24173222No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MDARFPPPAP SSSVVGGGGG FPARGYHRRA HSETFIRLPD ADLLELDPDA DFGFSDIDCF  60
PSLSDDSPAA SDPTPQPPPP PLPTQPQQQA AAPRPPSGAH MRSLSLDAVF FDGLSLQGGG  120
GGGGVGHKRS GSMDGATSPF EGESAPPGVL PDYAKKAVPA EKLAELALLD PKRAKRILAN  180
RQSAARSKER KIKYTSELER KVQTLQTEAT TLSAQLTLLQ RDTSGLTTEN RELKLRLQAM  240
EEQAKLRDAL NDALREEVQR LKIAAGQVPN MNGNPFNGGQ QQQMASYFPQ PQQMQYFGGH  300
QGQQNHPTHH HRNSSNGGGQ SLSDSMDFM
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0414870.0BT041487.1 Zea mays full-length cDNA clone ZM_BFc0033F19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008668106.11e-178PREDICTED: transcription factor RF2b isoform X1
RefseqNP_001141497.11e-177putative bZIP transcription factor superfamily protein
SwissprotQ9MA752e-73VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0B4J3J11e-178A0A0B4J3J1_MAIZE; Uncharacterized protein
TrEMBLB4FWJ91e-177B4FWJ9_MAIZE; BZIP transcription factor
STRINGGRMZM2G079365_P011e-177(Zea mays)
STRINGGRMZM5G821024_P011e-177(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.19e-47VIRE2-interacting protein 1